C++

The C++ API is the recommended interface through which advanced users and HPC developers can access Arbor.

Arbor makes a distinction between the description of a model, and the execution of a model.

A arb::recipe describes a model, and a arb::simulation is an executable instantiation of a model.

C++ API:

• Recipes
  • C++ best practices
  • Recipe
  • Cells
  • Synapses
  • Probes
  • Event generator and schedules
  • Example
• Cells
  • Cell identifiers and indexes
• Cable cells
  • The cable_cell object
  • Cell dynamics
  • Electrical properties and ion values
  • Global properties
  • Reversal potential dynamics
  • Overriding properties locally
  • Cable cell probes
  • Discretisation and CV policies
• Cable cell morphologies
  • Morphology API
  • Constructing cell morphologies
  • Identifying sites and subsets of the morphology
  • Translating regions and locsets to cables and locations
  • From morphologies to points and segments
• Interconnectivity
• Hardware management
  • libarborenv
  • libarbor
• Domain decomposition
  • Load balancers
  • Decomposition
• Simulations
  • From recipe to simulation
  • Class documentation
• Profiler
  • Compilation
  • Instrumenting code
  • Running the profiler
• NeuroML support
  • Libxml2 interface
  • NeuroML 2 morphology support
  • Exceptions
• Cable cells
  • The cable_cell object
  • Cell dynamics
  • Electrical properties and ion values
  • Global properties
  • Reversal potential dynamics
  • Overriding properties locally
  • Cable cell probes
  • Discretisation and CV policies